rs30745867 SNP Detail

Summary

• ID
  rs30745867
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83978324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAC TCTGCAGTTC CCAGCCCCGG
  Y
  GCCAATGCCT TGTAGCGTTT GTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45460520	mCV24158581	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss320822213	CHEV_3_83874939	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30745867					SNP	C	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83978324 () rs orientation: forward

Symbol	Name	Function Class
Gm56775	predicted gene, 56775	within coordinates
Gm65750	predicted gene, 65750	952 bp upstream
Rr397735	regulatory region 397735	1539 bp downstream
Rr578974	regulatory region 578974	1577 bp distal
Rr578975	regulatory region 578975	1217 bp distal
Rr578976	regulatory region 578976	462 bp proximal
Rr578977	regulatory region 578977	771 bp proximal
Tssr29729	transcription start site region 29729	981 bp upstream