rs30744158 SNP Detail

Summary

• ID
  rs30744158
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153663605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttgcgagtc tgaatttgag atgaccttga
  tcacagagga tacatcatct cagaaCACAT CATATGCAGA ATAATATGTG GCCACATGTC
  CAGGTGTAGA ATCCAAAATA AATTCAAGAC CACTTAGCCC TTCTTCCCCC CCCCCCCCCG
  R
  TCCCCCAAGG GACTTTCAGA AACATAGCGG TCAAATGACT AAGTCTACAG CTGCCTAAAC
  AAAATGAGTT GTTCTCAGAA AAATAACCAT AACGCCACTA GCAGTTCTCA GAAAAAGTCC
  CCTACCCTGC TCCACACTGA ATTCTGAGAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45460600	mCV23501193	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss321031954	CHEV_3_153620932	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30744158					SNP	G	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153663605 () rs orientation: forward

Symbol	Name	Function Class
Gm64825	predicted gene, 64825	1930 bp upstream
Rr398135	regulatory region 398135	20 bp upstream
Rr587804	regulatory region 587804	1440 bp proximal
Rr587805	regulatory region 587805	1617 bp proximal
Rr587806	regulatory region 587806	1941 bp proximal
Tssr32440	transcription start site region 32440	429 bp upstream