rs30737454 SNP Detail

Summary

• ID
  rs30737454
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:72377221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCACAGTTT GATAGTAATT
  GCAAGACCCA TCTCTTATAC ATCTGTAGCT TCCAAAGTGA CATGGCCTGC CTTGCCTGTT
  AGGATAACCT AGCAGTGGAC ATGTCCTCAA CAGCAGGAGC ACTATTGGCC TAGTGATTCC
  AGCTGCTAAA CACATCTGGC CCCAGTGACC CCTGCTTTTA TGTCTACATC TGCCGGCAGT
  R
  GAGCTCAGTG TGCCTCAGAA CTCCTACAGA CTTCAAGGAC AGCAGCTACA ATAACATTGA
  GATATTTGCC CTTTTAGCCA TGTTGATATT TGCACTAAAG CTGGCAACTT AGTGGGAGGG
  AAGAGGGAGG TGAGAAGCCA AACCTCCACC TTGAGACTGG CCTCCATCTT AAAGAGAAAA
  AAGAAAAAAG CTGCACCCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47979434	NES11919366	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30737454					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47979434	NES11919366	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72377221 () rs orientation: forward

Symbol	Name	Function Class
Rr399702	regulatory region 399702	1636 bp upstream
Rr632172	regulatory region 632172	1660 bp proximal
Rr632173	regulatory region 632173	1773 bp proximal