rs30737095 SNP Detail

Summary

• ID
  rs30737095
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72284797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTAAGCC CACATCAGTC
  ATAAAGACAA CAGGGCACAC AGTCAAGCCT TTCTGAAGCC TGTGTGATGG AAGGAACGTG
  CAGACTATAG AGCAGGATGA GCTGAGGGGT CGCACAGATA AAAATGGTAA CAGACAGGTC
  AGCCAGGGAG AGGCTCTGAA GAGGGTAACA ACTAAGCCAA GATCTAGGAG AAAACAAGGT
  Y
  CCCAGGGGCC AAGGACATCG ATCCATCAAT AAAAAATGAG CTCAATCAGA TGTTGGAGGG
  AGGGACTCTG TAAGGAGGGA CCAGGAGCAG GGGGCAGCGT TTGGGGTGTA AAGGAATAGA
  TAAATGCCTT TAAAATGAGT TCAGAGGGCT AGGAAGATGG CTCAGTGAGT ACAGTCCTTG
  CTGAACCTGA GTTCAGATAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	WSB/EiJ
ss47978468	NES11923126	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	WSB/EiJ
rs30737095					SNP	C	C	T	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47978468	NES11923126	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72284797 () rs orientation: forward

Symbol	Name	Function Class
Rr632127	regulatory region 632127	655 bp proximal
Sftpb	surfactant associated protein B	Intron
Tssr57085	transcription start site region 57085	1916 bp downstream
Tssr57086	transcription start site region 57086	1871 bp downstream
Tssr57087	transcription start site region 57087	1836 bp downstream
Tssr57088	transcription start site region 57088	1784 bp downstream
Tssr57089	transcription start site region 57089	1023 bp downstream
Tssr57090	transcription start site region 57090	948 bp downstream
Tssr57091	transcription start site region 57091	886 bp downstream
Tssr57092	transcription start site region 57092	601 bp downstream