rs30736716 SNP Detail

Summary

• ID
  rs30736716
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:72377037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCAAACTC ATGGCCTCAT
  GCATGTGAGG CAAGTAAGTA CCTAACCACT GAGCTCCACG GCCCAGAACC ATCACTGTGC
  ACGGTCCTGC AAGAGTCAAT TCAAACTTCA CAAGCTGCAC AGACTCTCTC TGAGCCACGG
  GTTCTTATTT TTTGTTTTCT GTATAGGGAT GTTCTGCCTG CTGGGCCACA GTTTGATAGT
  R
  ATTGCAAGAC CCATCTCTTA TACATCTGTA GCTTCCAAAG TGACATGGCC TGCCTTGCCT
  GTTAGGATAA CCTAGCAGTG GACATGTCCT CAACAGCAGG AGCACTATTG GCCTAGTGAT
  TCCAGCTGCT AAACACATCT GGCCCCAGTG ACCCCTGCTT TTATGTCTAC ATCTGCCGGC
  AGTGGAGCTC AGTGTGCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47979426	NES11919360	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30736716					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47979426	NES11919360	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72377037 () rs orientation: forward

Symbol	Name	Function Class
Rr399702	regulatory region 399702	1820 bp upstream
Rr632172	regulatory region 632172	1844 bp proximal
Rr632173	regulatory region 632173	1957 bp proximal