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rs30735806 SNP Detail
Summary
  • ID
    rs30735806
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr6:72217205 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TGCCCTCATC CTGCCCTGAC
    CTCATTGTTA AAGTGTGGGG CTCACTCTGC ATTCCTCTTT CTAGGGGTCA ACAAGGGGGA
    GGCCCAGCAG GGTGCAGGCA GAAAGGCTAT CTGCTCTTGC CATCTGTTTA CCTATGGGGC
    TCTGTTTCAA CCAGGTGATA GAATCTATCT CAGTCACTTA ATGTGGCCAG TAGGAATATT
    K
    GACATCTATG TTTGTGTTGG GGGAGAGGGC GGGCAGAGAG GTGATGACTC AGTAGTTAAG
    AGCACTTCAG AGGACTCAGA TTCCGTTCCT AGCATCCACA TTGTGCCTGC TGTTCAGCAC
    CTCCTGTATG TAATTCCAGT TCCTGGGGAT CCAAGACCTG CTTTCTTCTC TCCTCTGGGA
    CCTGCACACA CATAGTGCAT                                            
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss47977608 NES11927773 PERLEGEN MM_PANEL2 f SNP T T G T T T G T T G G G T G T
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs30735806 SNP T T G T T T G T T G G G T G T
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss47977608 NES11927773 PERLEGEN MM_PANEL f SNP G/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr6:72217205 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm67899 predicted gene, 67899 1624 bp downstream
Rr632103 regulatory region 632103 within coordinates
Rr632104 regulatory region 632104 1140 bp proximal
Rr632105 regulatory region 632105 1604 bp proximal
Rr632106 regulatory region 632106 1999 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory