TGCCCTCATC CTGCCCTGAC CTCATTGTTA AAGTGTGGGG CTCACTCTGC ATTCCTCTTT CTAGGGGTCA ACAAGGGGGA GGCCCAGCAG GGTGCAGGCA GAAAGGCTAT CTGCTCTTGC CATCTGTTTA CCTATGGGGC TCTGTTTCAA CCAGGTGATA GAATCTATCT CAGTCACTTA ATGTGGCCAG TAGGAATATT K GACATCTATG TTTGTGTTGG GGGAGAGGGC GGGCAGAGAG GTGATGACTC AGTAGTTAAG AGCACTTCAG AGGACTCAGA TTCCGTTCCT AGCATCCACA TTGTGCCTGC TGTTCAGCAC CTCCTGTATG TAATTCCAGT TCCTGGGGAT CCAAGACCTG CTTTCTTCTC TCCTCTGGGA CCTGCACACA CATAGTGCAT K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss47977608 | NES11927773 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | G | T | T | T | G | T | T | G | G | G | T | G | T |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs30735806 | SNP | T | T | G | T | T | T | G | T | T | G | G | G | T | G | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss47977608 | NES11927773 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr6:72217205 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm67899 | predicted gene, 67899 | 1624 bp downstream | ||||||
Rr632103 | regulatory region 632103 | within coordinates | ||||||
Rr632104 | regulatory region 632104 | 1140 bp proximal | ||||||
Rr632105 | regulatory region 632105 | 1604 bp proximal | ||||||
Rr632106 | regulatory region 632106 | 1999 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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