rs30731441 SNP Detail

Summary

• ID
  rs30731441
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:154402782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCACATCAC ACAGAAACTC
  CTTAGAAGAT GTGAGTTTGA AACTCACCCC AGACCTGTGG GATTTGCTGT TTCTCTATCT
  CTCGGGGCTC TTGGGGGGGT GGGGGTGGGT TATACCCACT TCACTCAGAG TGTGAGCGCT
  GTGACTCTCC AGGAGCTTCC AGCCTAACTG GGGAGAGAAG ACAATCCCAG AGACAGATAA
  M
  GATGACAAAC AAGCCAACTG CCAAGGAGAT ATAGTAATGG CAGTCAGGAA GGCCTAACTC
  TAGACACTTC GCAATGACAC GAAGTCGGTG CATTCTAGAC ACCTTAAGTG GGTTATCTGA
  AGTAAAAGGA AGCACCAACA GTATAAAATT ACAGCTAAAA TTGAAGAAGG AAATTAAGAA
  CATGAATGTG GGGTCTGGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	WSB/EiJ
ss47478020	NES10331556	PERLEGEN	MM_PANEL2	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	WSB/EiJ
rs30731441					SNP	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47478020	NES10331556	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:154402782 () rs orientation: forward

Symbol	Name	Function Class
Rr587889	regulatory region 587889	260 bp distal