rs30728505 SNP Detail

Summary

• ID
  rs30728505
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57881412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATATCTTC GTATCTTGTT
  TGCCTGCCTG CCTCCAGGCA GTGCGTCAAT CCAGACAGAA CAGGAATTTA GCTGTGGTTC
  AAACAGTGCT GCCATTGCTT GTAACAGTAC CTGGGATCTG GGTGGTGGTG GTCAGTAGCT
  AGATTTTGAA GTACCAGGCT AAAATAATGA TCAAATGGGG TTGAAACGAC ATGATCCATG
  R
  GAGTTTAAAG TCACAGAAGA GTCTGAGGTT CAAGGGTTGG AAGTAAACTC ATTTTTACCT
  CATCTCTGAG TCTCCAAGAA ACATCTGGTT TGTGTATGTG TTTAATTATA ATGTACCTCA
  TTACAAAAGA ATTTGACTGC ATTATTTTCA AAGATATGTT TGTATCTCTC TGAATCCATG
  AAGAAATATG TAAATATATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46978687	NES10794277	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30728505					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46978687	NES10794277	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57881412 () rs orientation: forward

Symbol	Name	Function Class
Gm32753	predicted gene, 32753	within coordinates
Rr577179	regulatory region 577179	1008 bp distal