rs30725068 SNP Detail

Summary

• ID
  rs30725068
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57879097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCCACTGTG CATGTGTTGA
  CATATAGAAG CCCACCAACC ATTCAGTTCT AGAAATGATT GTCATATGCC TGGAAGAGGC
  CAGGGGAAAT ATTTGGTTTG AAGACAAATA TTCATAAGGA ACCATAAACT TAGGCTTTGA
  ACATTGCTTT CAACCATGGT TATGAATACA GTCCTAGGCG CAGATGCTTC TCTTCAATTC
  Y
  AAACCCAGGC GTGCCTCGTG ACTGTACTGG TTCTACCTCT AGAATTCTTT CAGTTAATTA
  AAAGAAAAAA AAAAAAAACC TGAGCTGCAA TTACCTGTGA GATCCACAGC TACATACCAT
  TGCATTTTTT TTTTAAATTA AAGCTTATCA TTTGTTAAAC AAAAATGTTA AGAACACACT
  ACAGTTCTGT GACCTGTGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45513943	mCV22832861	ABI	CRAMUS_MOUSE	f	SNP		T	C					T	T
ss46978645	NES10794256	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T		T	T	T	C	T	T	C	T
ss135205272	ENSMUSSNP3277227	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30725068					SNP	T	T	C	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46978645	NES10794256	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57879097 () rs orientation: forward

Symbol	Name	Function Class
Gm32753	predicted gene, 32753	within coordinates
Rr577179	regulatory region 577179	828 bp proximal