rs30717155 SNP Detail

Summary

• ID
  rs30717155
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57354118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAGAGCAC CCAACTGTTT
  CCCTCTTCTG GAGTGTCTGA AGACAGCTTC AGTGTACTTA CATATAATAA ATACATAAAT
  ATTTTTAAAA AATAAGCAAA ATTTTTAAAA AATCAGACAG AACAAGAGGT GGTTGAAACA
  CAGGCATGAT GTGGAGCTCA TGTGGATGGA GTAACATGCT GTTCTTTATT CTTGTGATAT
  M
  CATGATATGC GTGTCCTGTA GAAATGAGAA GCCTTTATCA CAGGACTTGA AGGTCAGAGG
  CATTAAGGGG AATCCTGGGA AAGTGGAGAG TTGAAGAGCC AGTGTGTATA TTATAGAGGT
  GAGGTCATGG ATCAGCAATA GTCCATACGA GCTAACAGGT AGCTGCTGCT TCCCCCTGCC
  CACCAGGAGC TCAAGAGTCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss45514361	mCV24428255	ABI	CRAMUS_MOUSE	f	SNP		A	C					A	A
ss46977235	NES10795730	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		A	A	A	C	A	A	C
ss135201365	ENSMUSSNP3546348	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs30717155					SNP	A	A	C	A	A	A	A	A	A	A	A	C	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46977235	NES10795730	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57354118 () rs orientation: forward

Symbol	Name	Function Class
Rr577097	regulatory region 577097	492 bp distal
Rr577098	regulatory region 577098	1179 bp proximal
Rr577099	regulatory region 577099	1379 bp proximal
Rr577100	regulatory region 577100	1821 bp proximal
Rr577101	regulatory region 577101	1981 bp proximal