rs30716992 SNP Detail

Summary

• ID
  rs30716992
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90336626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTGAGTT GGTCATCTTT
  CTGTTCCTGT GACAGTAGAA ATCCCCAGCT TGTCACGAGG AAAGGCCTCT CTGGATCACA
  GCTTCACAGG TTACAGTTCA TGGTCAGTTG ACCACACTGC ATATAGGCAG CACAGTATGA
  CAAGAGCCTC TAGGAATGCA GGCAGAACCA TTCATTCATG ACAGGGAAAA GAAGAGGCCA
  R
  GATCTCATAC AAAGGCACTT CTCAATGACT TGAAGACCTC CCATGAGACT CCCCCCCTTA
  AAAGTTCCAC CACCTCCCAC AAGCAAGCAT CTAACATCCA AACTCTAGGG GACTCATTCT
  GATTGGCATT GGCCATTCCT CTGCTGCTGG AAATATTAAC TCAGATTCCT CAGACAAGGT
  CTATTCAGCA GTATTCACCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45957582	mCV23962482	ABI	CRAMUS_MOUSE	f	SNP		G						A
ss60907180	NES15949562	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A	G	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30716992					SNP	A	G	A	A	G	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60907180	NES15949562	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90336626 () rs orientation: forward

Symbol	Name	Function Class
Rr634185	regulatory region 634185	within coordinates
Rr634186	regulatory region 634186	295 bp proximal
Uroc1	urocanase domain containing 1	Intron