rs30715395 SNP Detail

Summary

• ID
  rs30715395
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57042253 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAATTACAT AATCTTCATT
  GTCTCTCAGG TAAAGCACTT CTAGAGGAAA TGGCTGTCTT CTTTTGGTTT TCCTGACTTT
  ATTTTTTTTT CTTTCCTCCT GGCTTTGTTT CAAAAATGTT GTTGTTGTTG TTATTGTTGT
  TGTTGTTGTT GTCATTAATA TTTCTCTCAA AATCTAGCCT TAATATATAG TCAGTTAGAA
  K
  CCATAATGGT TTCATTGATA ATGGCCTCAG AGGTTCATAT ATTTTCATGC TTAGTCCCCA
  GTTAGTAAAC TGTTTGAGAA GGATTAGAAA GATTAGAAGA TGTGGCCTTA TTGGAGAAAG
  TGTGGCCTTA ATGAAGGAAG TATCACTCAG GATGGGCTTT AATGCTTCAA AAGTCCAGAC
  CAGGATCCGT TGTCTCTCTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss46976002	NES10788079	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs30715395					SNP	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46976002	NES10788079	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57042253 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13195	CpG island 13195	1988 bp proximal
Gm8177	predicted gene 8177	662 bp downstream
Rr375016	regulatory region 375016	1526 bp upstream
Rr577070	regulatory region 577070	1954 bp proximal