rs30713421 SNP Detail

Summary

• ID
  rs30713421
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108713039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGGCAGGCC TCTAACTCAC TCTGTATGCA TAAATGATTT
  TGAATTTCTG ATTTCCTGCA TCTGTCTGCA GTATTGTATT ACAGACATGA GCCACCCAGA
  Y
  GCTTTTTAAG CGGTGCTAGG AGTTCAGGCT GATTCTGACA TGCTAGGTAA GCACTCTACT
  TACTGAGCTA CGTCCTCACC CCCTATATAG TTATTTAAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45957637	mCV24655364	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss133508240	ENSMUSSNP5946865	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30713421					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108713039 () rs orientation: forward

Symbol	Name	Function Class
Rr636189	regulatory region 636189	within coordinates
Rr636190	regulatory region 636190	250 bp proximal