rs30710998 SNP Detail

Summary

• ID
  rs30710998
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151771440 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGTCTCCC AGGGACATCA
  ACCAAACAGG GCATAAAACA CGCTACAGTA AGACCAGGCG CATATTCTCA CATCGAGGCT
  GGATGAGGCA ACTCAGTAGG TGGAAAGAGG CCCCAGTGGC AGGCACAAAA GTCGGAGACA
  AACGCATCTC CCTCTATTAA AAATCCTACA AGAATACCAG CTACATGATC ATAACATATA
  Y
  GCAGAAGACT GCCTGTCTGT GTACTAGATG CTGTCTGCGG AGATCTGTGG GGCTCTGGCC
  CCTCCAGAGC AGCCAAAGAG TTGTATTTTC CAAAGGGGAA GAGGAGTCAG TCTTACACTG
  CAGGACACTG TGCTGGTAGG TGAGGGTTGG AAGTGGGGAG ATATCAGATG TAGGCCAGCT
  GTCTGCTGGG TCTTTTCAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45459389	mCV24212028	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss136100463	ENSMUSSNP5150399	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss321027900	CHEV_3_151728767	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30710998					SNP	T	T	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151771440 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	within coordinates
Rr587440	regulatory region 587440	935 bp proximal
Rr587441	regulatory region 587441	1042 bp proximal