rs30709972 SNP Detail

Summary

• ID
  rs30709972
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:18840897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAA AATCTTTAAT AGCTGCCTGG
  M
  TTCTCATAGA AAAGTAATAT ATAGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45458570	mCV22670140	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss134662093	ENSMUSSNP42421	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		C
ss320676625	CHEV_3_18686733	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30709972					SNP	A	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18840897 () rs orientation: forward

Symbol	Name	Function Class
Gm65711	predicted gene, 65711	within coordinates
Rr374612	regulatory region 374612	1601 bp upstream
Rr573923	regulatory region 573923	862 bp proximal