rs30708897 SNP Detail

Summary

• ID
  rs30708897
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:71957563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGA GTATACAGCA AGAGTCAAAC
  M
  ACAAGCTTAG TTCACCCGCA GTACT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45956342	mCV24564967	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A
ss133280804	ENSMUSSNP6937962	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C	A
ss321820008	CHEV_6_71930573	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30708897					SNP	C	C	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71957563 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm68334	predicted gene, 68334			within coordinates
Polr1a	polymerase (RNA) I polypeptide A			Intron
				mRNA-UTR
Rr632036	regulatory region 632036			within coordinates
Rr632037	regulatory region 632037			866 bp proximal