rs30708559 SNP Detail

Summary

• ID
  rs30708559
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:136008187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                 GATCCAG CTCAGGGAAG
  GTCCCAAGGC CTGATACTAT TACTGAGGCT ATGGAACACT CACAAAAAGG GACCTATCAT
  S
  ACTGCCCTCC AAAAGACCCA ACAAACAGCT GAAAGAGTCA GAGGCAGATA TTTGTACCCA
  ACCAATGGAC AGAAGCAGCT GACCCCTGTT GTTGAATTAG GGAAAGACTG AAAGGAGCTG
  AGAAGGGCAA CCCTGTAAGA GGACCAGCAG TCTCAATTAA TCTGGATCCC CAAGATCTTT
  CAAACACTGG ATCACCAAAC AGGCAGCATA CACAAGCTGA TATGAGGCTG CCAACATGCA
  TCCAGCAGAG GACTGCCAGG TCTGTGTTCA TTCAGAAGTG ATGTACCTAA CCCTCAAGAG
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45956432	mCV25173896	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30708559					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136008187 () rs orientation: forward

Symbol	Name	Function Class
Bank1	B cell scaffold protein with ankyrin repeats 1	Intron
Rr398054	regulatory region 398054	1227 bp downstream
Rr585816	regulatory region 585816	1211 bp distal