rs30707672 SNP Detail

Summary

• ID
  rs30707672
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:80835454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGACTGCA CATGAGATGA
  GAGAAACAGG CACCGTGAAT AGAAAGGTCA CTCATGGTGA GCACTTCCTC TGGATGACTT
  CCATCCTGAG GACGTAGAGG CAGCTGAAGT CTCCCAGTGT TTATCAGAAA GGAGTGCAAC
  CACAATGCAT AGAGTAAATG TCTAAAGTAA GGGTCCCATA CTTGAGTGCT GTTGGCCCTT
  W
  GAAATAACTT GCACCCCACC CTGTCTCAAA GAGGCAACAA AGTTTGGCAT CAGTGATCTG
  CTCTTTCACC CAAGGGATGC TGAGAGTGCA TCTTCTGAAA GTCGGGAGTT AGAGCCGTAA
  TAACAGTTTC CTTCACCAGT TTGTACGTAT TTAAATTCAC AAATAATGTC GTGCTTTGGT
  TATTTCTTGA CTTTTAATTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45954578	mCV22540011	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss133329770	ENSMUSSNP6983250	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs30707672					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:80835454 () rs orientation: forward

Symbol	Name	Function Class
Gm66997	predicted gene, 66997	within coordinates
Rr632540	regulatory region 632540	1000 bp distal