rs30705561 SNP Detail

Summary

• ID
  rs30705561
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130508480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAAAAACA AAACCAGAAA AAAGCAGAGG TATTAGACAA
  CCAACATATA TGTCCGTTGT GCATAGGGGA ATTATGCTGT CTTTTTTTTT TCTTTAATTT
  R
  TGTTTTGTTT TGTTTTCTGA GACAGACTTT CTCTATGTAG CCCTGACTGA CCTATATCTC
  ACTCTGTAGA TCAGACTGGC CTCGAACTCA CAGATATCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45456559	mCV22791481	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	G
ss135898388	ENSMUSSNP4423075	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss320966221	CHEV_3_130417749	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30705561					SNP	G	G	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130508480 () rs orientation: forward

Symbol	Name	Function Class
Rr398018	regulatory region 398018	459 bp upstream
Rr585199	regulatory region 585199	495 bp distal
Rr585200	regulatory region 585200	85 bp proximal