rs30705125 SNP Detail

Summary

• ID
  rs30705125
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:119654497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTCTCTT CTTCTGCCTT
  GTGGGTTTGG AGGCTCAACC TTAGGTTATT GAACTTGGCA GCAAGCATCT TCACCTGCTG
  AGCCACCTCA ACAGCCCTTA GTAAACGTCC ATAATTTGAA AAATCCGAGA ATGGTAACCC
  ATAGGGACTT ACTCTCTGAG GCTTTGGAAT AAGGATGGAA ATGGGTTTTT TAGATTTAAA
  R
  GAAGTGAAAT ATAAAAACAA GTGTACATGG TCCTAAAAAT CTTACTAAAA GTTATTAAAA
  ATCCTTAAAA ATGTTCATTT TTGAGCAGTC AGCATAGAGT TGTATTGCCT TATCTGTGAG
  AGATATTCTA AGTGATATTC TTAGATGCCC CCCGTGGCTG GTATCAGTAA GCCCTATATG
  TACTATGTTT TTTCCTGAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss45456855	mCV23483267	ABI	CRAMUS_MOUSE	f	SNP		A	G				G	G
ss51015280	NES13913530	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G		G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs30705125					SNP	A	A	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51015280	NES13913530	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:119654497 () rs orientation: forward

Symbol	Name	Function Class
Rr583946	regulatory region 583946	1435 bp proximal