rs30705019 SNP Detail

Summary

• ID
  rs30705019
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95872829 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAC AGCCGGCTGT AATTCCATTT
  Y
  CAGAAGATTC AGCACTCCCT TCTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45457835	mCV27558393	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss135513269	ENSMUSSNP963581	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss320841282	CHEV_3_95769440	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30705019					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95872829 () rs orientation: forward

Symbol	Name	Function Class
Gm20940	predicted gene, 20940	1129 bp upstream
Rr581104	regulatory region 581104	1553 bp distal
Rr581105	regulatory region 581105	1627 bp distal
Rr581106	regulatory region 581106	within coordinates
Rr581107	regulatory region 581107	480 bp proximal