rs30699331 SNP Detail

Summary

• ID
  rs30699331
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:94372790 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAAAAAC AAACAAACAA
  ACAAACAACA AAACAAAAAA AAAACAACAA AAAAAACCTC TTCAGCCTTC AGAATGGCTT
  TAGGAACTAT TCTGCCTGTG GAGGGAGGAG GAGCTAAAAC ACACTATGGC CTTAAGGGCT
  AATCTGATGT ACAAGGTGGT TGGAAGACTG TAGGAGGGAA TTCCTCACCT CTAGGGCTCA
  R
  GAAAAGGACT TGGTACTGAA CCCCCCCTTC CCAGCCCCCG CACCTCAGGA CACCTCCCAT
  ATCCATTTCC CAATCCACCT CACTAGACCA AAGACTCCTG TCAGTGACAC AGAGACCAAT
  TCCAGGCCTC TGATCACAGC CTCTATCCCC CTAGACTGTC AGGAAAATGG CCTACTGCTA
  CCACACTGCT CTGCTGTTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45456027	mCV23189054	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss135505418	ENSMUSSNP6346277	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs30699331					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:94372790 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Riiad1	regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1			Intron
				Noncoding-Transcript-Variant
Rr580632	regulatory region 580632			309 bp distal
Rr580633	regulatory region 580633			within coordinates
Rr580634	regulatory region 580634			737 bp proximal