rs30694317 SNP Detail

Summary

• ID
  rs30694317
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:68191955 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCT CTGTTGGATA CTATCCAAAG
  Y
  CATTTGCACA GCCCTTCAAG GGACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45454922	mCV24617309	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss135262191	ENSMUSSNP3211424	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss320791296	CHEV_3_68088544	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30694317					SNP	C	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68191955 () rs orientation: forward

Symbol	Name	Function Class
Iqschfp	Iqcj and Schip1 fusion protein	Intron
Rr577989	regulatory region 577989	618 bp distal
Schip1	schwannomin interacting protein 1	Intron