rs30693886 SNP Detail

Summary

• ID
  rs30693886
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:118454044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTAATATAT TCTCGATCGT TTTAAAGATT GATTTATTTC
  ACGATTTTGT GTGTATGGAT GTTCCGTCTG CATGTATGTA TGTGTTCCAT GTCAATGCCT
  R
  GTACCTGCGG GGGTCAGAAG AGGGCATCGG CTCTCCTGGG ACTGGAGTAA CAGAGGATTT
  TGAGACACCA TGTGGGTGCT GGGAAATCAA ACCTGGGTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45954298	mCV24802922	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	A
ss133583010	ENSMUSSNP3815732	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
ss321924599	CHEV_6_118427101	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30693886					SNP	A	A	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:118454044 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17903	CpG island 17903	1881 bp proximal
Rr637483	regulatory region 637483	806 bp proximal
Rr637484	regulatory region 637484	1357 bp proximal
Zfp9	zinc finger protein 9	Intron