rs30689891 SNP Detail

Summary

• ID
  rs30689891
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71789885 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATGACTT TCATCCATCC
  ATCCCAGCAT CCAGAGGTAG GGACAAGAGG ATCAGAAATT CAAGGTCATC CTCAGTTACA
  CATCAATTTG AGGCCAGCTG GGGCTAATTG AGACTCTATC TCAAAAACCA ACCAACCAAC
  AGTAAGGCAG CAGGCTCACT CTAGCCTCAC TGGGAGGTCA CAAAGACCTT CAAGTGTGGT
  Y
  GGTTCTCTTG TTTTTACAGT ACACAGACTA GAAACTAAAG CAGCAGATTC AGAGGGCAGA
  AAACAGGAAG AAGAGATGGG AAGAAAGACT AGAAATCCAT TCATTCATTA CTCATTTACT
  AAGCCAGGGT TATGCACCAA CAGAGTTGAC AGGTAGAGAG CAAAGTCACA CAACTCAGAC
  TTGAACGGGT AGAGTATTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47973374	NES11911982	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30689891					SNP	C	C	C	C	C	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47973374	NES11911982	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71789885 () rs orientation: forward

Symbol	Name	Function Class
Mrpl35	mitochondrial ribosomal protein L35	96 bp downstream
Rr632010	regulatory region 632010	77 bp proximal