rs30681689 SNP Detail

Summary

• ID
  rs30681689
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:131843522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCCCTCC CTTCTCCCCT
  CCCCCTCTCT GGTTGAGGTT TCCTTGCTAG TCCTAGAAAG ATAATAGCAT TCTGTGGATG
  CTTCTCTTTT TATCAAAGCA CTCACCAATA CTTGGTAATA AAGATTTGTT TAGGTACTAA
  AGCAAAGCAG GAGATTTCCT GTGTAACTCA TGAATAACTT GGGAAATTCT GTTCCTGTGA
  R
  CTGGTCCAGT TGTTTGTGCA GAGCTGAGGC TGTGGGTGAG GAGGAAAGGG AATGGATGAA
  GGAAGCAGAG CAGAATCAGT CGCGAGTGGT CCTTGAAACA GTACAGTGTT ACTTCAGTGA
  GTTTCCCTAC AAAAGGTGCT TTAGAGAGAA GGGATGATAG TCTGTGTGTC TACTTACCTC
  GAGTAATTAA CTAACCAGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss46973603	NES10884357	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs30681689					SNP	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46973603	NES10884357	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131843522 () rs orientation: forward

Symbol	Name	Function Class
Dkk2	dickkopf WNT signaling pathway inhibitor 2	Intron
Rr585418	regulatory region 585418	186 bp proximal