rs30673033 SNP Detail

Summary

• ID
  rs30673033
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:131845113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCATGTACGT GTAATAGCAA GATTTCATAA GAAATGGAAG
  AGAGTGAACG GTGGCTTTCT CTCTCTTTAG GAACAAGAAA AACAGCTGAG GTATGGACCT
  W
  TGCGTTTAGA ACTGCCTTGC CTCAAGGATT GTTCCAGTAA CTACTGGAAT TTTTCCAGTT
  CTGCAAGTTG AATCAAATAA AGCATTTGTA TCCACTAAG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss45517125	mCV23618823	ABI	CRAMUS_MOUSE	f	SNP		A	A					A	T
ss46973635	NES10884323	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		T	A	A	A	A
ss135909005	ENSMUSSNP3298743	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs30673033					SNP	A	A	A	A	A	A	A	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46973635	NES10884323	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131845113 () rs orientation: forward

Symbol	Name	Function Class
Dkk2	dickkopf WNT signaling pathway inhibitor 2	Intron
Rr585418	regulatory region 585418	906 bp distal
Rr585419	regulatory region 585419	1760 bp proximal