rs30670361 SNP Detail

Summary

• ID
  rs30670361
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:56406240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCACCTCTT CTTCCATAGG
  TTTCCTTAGC CTGTGAGGGG AGGGATTTGA TGAAGACATT CTGTTCGTTG AATGTTCCAC
  GGTCTCTTAT TCTCTTTTTG CGAACCTGAC CCTCTAGGCA GCTCCTCTGG TTCAAATAGA
  ACACAGATTC TCACTCTGCA CCCATTCCTG CTTCTTACAT CTTACACTTA ACCTGGAAAG
  R
  AATTTGAGCC GCCACACTGC CTCAGTGACA ATGGTGATGT TTCTTGCTCT CTTTTGCTTA
  TAAGATTGTG TGTGTGTGTA TGCCGCGTGC ACGCGTGCAC AGGAGTCTGG CTGTATTCAT
  AATACTCTTT ATCTTTCTTA GAGAAAAATC ACTGGAGTTC TGCACTTTGA AATTTATGTA
  CACATGTAGT GAACTATCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46971612	NES10794287	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30670361					SNP	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46971612	NES10794287	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:56406240 () rs orientation: forward

Symbol	Name	Function Class
Rr577048	regulatory region 577048	309 bp proximal