rs30669237 SNP Detail

Summary

• ID
  rs30669237
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131592396 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCATGTAT ACACTTAGGC
  ACACACATAC ACCTGCACGC ACACACACAC ACACACACAC ACCAAATAAA TGTAAACATC
  TTTAAAATTC TTTCATTTGG AGATACAAGG ATGGCTCTGT GCTTTAGAGT ATTTACTGCC
  ATTACAAATG ACCCCACATT GAGCGTTCAG GTCTTGGCAC CCACATCGAG CAGTTTACAA
  Y
  TGCCTTCAGT CCAGCTCTCT CAGATGTGGC ACCCTCTAGT GGCCACCTTT GGCACTGCAC
  TCATGTGTAC AAACACATTT TTGTAATCTC AGCTCTGGAG AGGCTGAGGT GGGAGACTGG
  CGAGTTCAAG TAATAGTAAA TACTGCATGA TGAAACAACA ACAAAATTCC CCTCCTTCCA
  AATAACACAA AGGACCCCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	PWD/PhJ
ss46971391	NES10872409	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	PWD/PhJ
rs30669237					SNP	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46971391	NES10872409	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131592396 () rs orientation: forward

Symbol	Name	Function Class
Gm65547	predicted gene, 65547	1788 bp downstream
Rr585388	regulatory region 585388	within coordinates
Rr585389	regulatory region 585389	26 bp proximal