rs30664955 SNP Detail

Summary

• ID
  rs30664955
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7732039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAAGCCTGTC TCTCCTACCA AACAGCAAGA ATTCTAGTAC AGTTCCCAAC TGCTTAAGAC
  CTTTCTCCTT TCACACAGCT GTAGACCTGA AGTTTCTAGA AAGTTTTCTC TTGTCCCCAT
  TTACAGAGGA CAGAGACTAA CCCCTCAGGT GATTCTGGTG GCTTCCGGCT TTTCCTTTAT
  CAGATTGCAA TTCCATCTGA ATCACCTCTG AGCTTCCAGC TACCACAGAT CTCTCACAGA
  AAGGGGAAGA GGGGGAGGAG TGGGTTCACA TTGTAACTGG AGAGCCACCA TAATGCTGTA
  Y
  GTGGCCAATG CTTACTGTTC CAGGAGGAGG CCTACTGCAC TTGGCTCAGT CCTGTATCAT
  AATACCTTTA ATAAAATGTC CTTCCCTGTT CCCGAGAGTC CTAAAATGAC ATACACTGTT
  GAATCTTGGT TTGACTTGGG TTGAAGCCCG TAAATGTCTA GGGGAACCCT TCGGGCTGAT
  GAGAGTGGCA GTGTGAGTCT GGGTGTCTGT CCTATCACTG TTGACATAAT GTAAAGCTTT
  GTTTTCTATG GTTTCCATTA TCTAACCTCT CCACACGCTA TCTTTGGAAA CCTACAGTAC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45951882	mCV24779803	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss132954099	ENSMUSSNP2769857	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30664955					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7732039 () rs orientation: forward

Symbol	Name	Function Class
Rr626314	regulatory region 626314	133 bp proximal
Rr626315	regulatory region 626315	938 bp proximal
Rr626316	regulatory region 626316	1198 bp proximal