rs30661673 SNP Detail

Summary

• ID
  rs30661673
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:107987220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCG TCTTCTCCTT CCATCTTCCT
  K
  TCTTGTCCCT CCTGTCCTTC CCTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45950773	mCV22972386	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G	T
ss133493396	ENSMUSSNP2333673	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss321891400	CHEV_6_107960253	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30661673					SNP	T	T	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107987220 () rs orientation: forward

Symbol	Name	Function Class
Rr636023	regulatory region 636023	1643 bp distal
Rr636024	regulatory region 636024	1725 bp distal