rs30660272 SNP Detail

Summary

• ID
  rs30660272
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:36583901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAT AACAAGCCTA AAGAAAATCT
  K
  ATTTACCTTT TGTTTTTCTT TTGTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45952028	mCV25303718	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss133119753	ENSMUSSNP5878925	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss321785332	CHEV_6_36556966	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs30660272					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:36583901 () rs orientation: forward

Symbol	Name	Function Class
Rr628549	regulatory region 628549	782 bp distal
Rr628550	regulatory region 628550	1359 bp proximal