rs30660240 SNP Detail

Summary

• ID
  rs30660240
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:113358441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACAGGGCTA GCCTCAGCTA CACAGTGGAT CCTCTCTCAA
  GAAACCAAAA GCTGCAGCGG GGGTAAATCT GCGGTGTACA TAGTTGTGAT AAGCCACGCC
  Y
  CCACATTAGA TGATAAAGGT AGTAAACCCA GGTCCTTGGG ACAGGCTAGG CACACACTTT
  ACAACTGAAC CGTATCTCCA ACTCCAATGT AATTTATAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45951734	mCV22281403	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss133564653	ENSMUSSNP6022418	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30660240					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113358441 () rs orientation: forward

Symbol	Name	Function Class
Arpc4	actin related protein 2/3 complex, subunit 4	Intron
Rr636501	regulatory region 636501	1892 bp distal
Rr636502	regulatory region 636502	254 bp proximal
Tssr58200	transcription start site region 58200	733 bp downstream