rs30657442 SNP Detail

Summary

• ID
  rs30657442
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:97858073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACACAGTCT GGGTTTTGAG TTGGATTTCT GTATTCCATT
  TGGAACACAC TAAATTTAAG TAAAAATTAT GTGGATATGT TAATAACTAC TTTATAATTG
  R
  TTTTAGGGGG TCAAAGATCT ATATTTAAAT TAAGGAAGGG GAATAGGTAT AGCTCAGTGG
  TAGAGTGCTT GCCTAAGAGT GTATGAAATC CTGGGTTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45950027	mCV24879900	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	A
ss133422161	ENSMUSSNP2336012	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30657442					SNP	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:97858073 () rs orientation: forward

Symbol	Name	Function Class
Mitf	melanogenesis associated transcription factor	Intron
Rr635233	regulatory region 635233	344 bp distal
Rr635234	regulatory region 635234	819 bp proximal
Tssr57900	transcription start site region 57900	593 bp downstream