rs30656317 SNP Detail

Summary

• ID
  rs30656317
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:30911939 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTC AAAAGTTTAT TCAATGATGA
  M
  GACAGCCTAA AATGAACGGG GATGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45452822	mCV25261610	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss320694185	CHEV_3_30756712	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs30656317					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:30911939 () rs orientation: forward

Symbol	Name	Function Class
Gm42199	predicted gene, 42199	1421 bp upstream
Gpr160	G protein-coupled receptor 160	Intron
Rr574831	regulatory region 574831	1880 bp distal
Rr574832	regulatory region 574832	1765 bp distal
Rr574833	regulatory region 574833	1433 bp distal
Rr574834	regulatory region 574834	1133 bp distal
Tssr28696	transcription start site region 28696	1788 bp downstream
Tssr28697	transcription start site region 28697	1783 bp downstream
Tssr28698	transcription start site region 28698	1764 bp downstream