rs30655497 SNP Detail

Summary

• ID
  rs30655497
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83810198 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTT AGTAAACAAG TAGTTATATA
  W
  TGAAAATATG TAGATAAATT CACTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45950699	mCV24607640	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A	A
ss133350486	ENSMUSSNP5842829	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		A
ss321844845	CHEV_6_83783210	CHEVERUD	SCREENING_POP	f	SNP						T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30655497					SNP	T	T	T	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83810198 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17619	CpG island 17619	1238 bp distal
Gm68055	predicted gene, 68055	409 bp downstream
Paip2b	poly(A) binding protein interacting protein 2B	1475 bp upstream
Rr399726	regulatory region 399726	1195 bp downstream
Rr632951	regulatory region 632951	1933 bp distal
Rr632952	regulatory region 632952	1486 bp distal
Rr632953	regulatory region 632953	1772 bp distal
Rr632954	regulatory region 632954	985 bp distal
Rr632955	regulatory region 632955	1444 bp distal
Tssr61712	transcription start site region 61712	1514 bp upstream
Tssr61713	transcription start site region 61713	1496 bp upstream
Tssr61714	transcription start site region 61714	1466 bp upstream