CATGT GAGATCACAG TAGAGGATGA M GTTGTTGCTT CCAGGCTACT TAGTC M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46970395 | NES10875506 | PERLEGEN | MM_PANEL2 | f | SNP | C | A | C | A | A | A | A | A | C | A | A | C | C | A | A | |||
ss135892685 | ENSMUSSNP440415 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | A | A | |||||||||||||||
ss320964570 | CHEV_3_129874020 | CHEVERUD | SCREENING_POP | f | SNP | C | C | ||||||||||||||||
SNP Consensus Information | |||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
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rs30653968 | SNP | C | C | A | C | A | A | A | A | A | C | A | C | A | C | C | A | C | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46970395 | NES10875506 | PERLEGEN | MM_PANEL | f | SNP | A/C |
Location: Chr3:129964751 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4930502M04Rik | RIKEN cDNA 4930502M04 gene | within coordinates | ||||||
Cpgi13822 | CpG island 13822 | 1690 bp proximal | ||||||
Rr585141 | regulatory region 585141 | 1703 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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