rs30653573 SNP Detail

Summary

• ID
  rs30653573
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143869097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGTTTGG CTTGCAAAAT
  TCCAGTTTCC ACACTGAAAT ACTAATTAGC AATCAGATGG GTAAGAACCC CTATTTTGAG
  ACAGTTCTTC ATGTGTTAAA GTTGCATCCT GCTAGTATTA CCGTAACGTC ATTTATTTTG
  CCTGAAGTGT GGACGTCCCT TCATGGCCCA GCACACTGTA CCTTCCATTT TTAGGGAAAC
  R
  AAGTAAAGCA AAGCCGATTC TTCTGGGACA AGGTAAAGGT TTGACTCTTC TTGTTTACAC
  AAGAAAGCCT CCAAGGAAAC CGTCCAAACT TCAGCTTCAG CTTGGAAGGT AGGCTCGGTC
  TCCCACTGAA GGTGATGCTA GGGTTGTTAA GACAGATCAG CAGAAACCAC CAAACCTAAC
  AACGTGAGTT CAATTCCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45451332	mCV25051891	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss136029070	ENSMUSSNP1426426	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30653573					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143869097 () rs orientation: forward

Symbol	Name	Function Class
Gm34162	predicted gene, 34162	within coordinates
Rr586589	regulatory region 586589	1689 bp distal
Rr586590	regulatory region 586590	519 bp proximal
Rr586591	regulatory region 586591	1403 bp proximal