rs30652717 SNP Detail

Summary

• ID
  rs30652717
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125101089 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGACACACA CATACATACT
  ACACACATGC ATATATACAC ACACACAAAT ATAGACATCT ACAAATACTA CACACACACA
  CACACACACA CACACACACA CAATTTTCTT TTTCAAAGAC CTCAATTCAT TCACAACTAA
  TATGTAATAA TATGTTGATA TTTTAGGGAA ATAGCAGCAT TCCATTTAAC TTCAATTAAA
  M
  ACATGCAGTG TATTAAGGAC ATACCATCTT ACTACTTCTT GAAGACACGT TAAAGGCTAT
  TTTTGTTTTC AAGTAAAGCT GCAGGGGACG TTTTCATAGT TGATATCACA ATGCACATGG
  GGTAATGTGG AAACAATTTT AATTACAATA ATTTAAACAT TCAAACATTC TTTAAATTTC
  ATTAAATAAA ATAATAGGCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45450668	mCV24036423	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss320935451	CHEV_3_125010358	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30652717					SNP	A	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125101089 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	382 bp distal