rs30652576 SNP Detail

Summary

• ID
  rs30652576
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148571835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATACACAGA CCCAGATCCC AGCCTCTACA GCCATTTGGG
  CTACATGTTC TAACGCAGGC ACTGTCTGCA CTCACGAACA GGAGGTTCTT GCTAGCCCTT
  Y
  CCACCTTGCA TGTGAAAGTC TGCAGAGAAG GCAAAGGCCC TAAAAATAAC CATGAGCACA
  GTGCACGCTT AAGAGCTGCT ACTGTTTTTC ACGGAAGCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45451312	mCV23529005	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss136064558	ENSMUSSNP2641442	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
ss321016690	CHEV_3_148529163	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30652576					SNP	T	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148571835 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Rr375898	regulatory region 375898	439 bp downstream
Rr587218	regulatory region 587218	1487 bp proximal