rs30652551 SNP Detail

Summary

• ID
  rs30652551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:141296064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTC TTAAATGAGT CTTTGTATTT
  R
  AGAGACGCTG AAGCAGATTT GTAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45452005	mCV24102829	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss136005339	ENSMUSSNP1365860	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320993579	CHEV_3_141253267	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30652551					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141296064 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr586339	regulatory region 586339			434 bp distal
Tssr32042	transcription start site region 32042			1761 bp upstream
Unc5c	unc-5 netrin receptor C			Intron
				Noncoding-Transcript-Variant