rs30652482 SNP Detail

Summary

• ID
  rs30652482
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101263326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCTTGCA GAAGGTCCCA
  ACAGACCAGG CTAAAAATAA AAACCAGTCG TTTAAAATGA AGTTCCGCGT CACCAAAGTG
  AGACTAAGCT GTTTATCTGA CCTTGTCAGG AATCAGGGCG ACAGAGATGA TAGCTTGCAA
  ACAGCCAGGT TCAGGCAGCA GAATAATGAA GGCTACTGTG CCCTAATCCG AAAAACCCCC
  Y
  TACCTCCAAA GTACCTGAAG TTAAGGAGTC CCTTATTTTT CTGTTGCTTT GTCTCTCATC
  CCTGCCTTAC ATGGCCAGGG CTTTGGAACA GCCCATCTGC CTTCTGTGCT TTGTTTCTGC
  TTTCTCCTGC CTTTTCTTTC TAGGAAACCG AGCTCATCCG CCCAGTCCCT TGGAACACAG
  TCTACTCTGT GCAGCAAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45451229	mCV23815897	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss135546739	ENSMUSSNP3015395	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss320851925	CHEV_3_101159933	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs30652482					SNP	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101263326 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	1407 bp upstream
Rr582017	regulatory region 582017	1555 bp distal
Rr582018	regulatory region 582018	917 bp distal
Rr582019	regulatory region 582019	within coordinates
Rr582020	regulatory region 582020	674 bp proximal