rs30651894 SNP Detail

Summary

• ID
  rs30651894
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:69031527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTC CAATGCACCT ACATGAATTC
  R
  GTCATTAGTA GTGGCTACAG ATATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45449763	mCV24616017	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss135265134	ENSMUSSNP4810555	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss320791950	CHEV_3_68928116	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30651894					SNP	A	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69031527 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13258	CpG island 13258	1718 bp proximal
Gm37558	predicted gene, 37558	1470 bp upstream
Kpna4	karyopherin subunit alpha 4	Intron
Rr578129	regulatory region 578129	1757 bp proximal
Rr578130	regulatory region 578130	1841 bp proximal
Rr578131	regulatory region 578131	1989 bp proximal
Tssr33536	transcription start site region 33536	1162 bp downstream