rs30650285 SNP Detail

Summary

• ID
  rs30650285
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144387065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCACACACAG GAAAAATAAA ATAAAAAGGA GGCATACAGA
  AGTCAATTGA CTTTTTATAG TCCCACAGAT GAGAAGAGTC AGAAGCAGAA ACAGAGCTCA
  R
  GCATTCTGTA TCCCAAGCCA GTCTGACGAA CAACCTCTCT GGGACTGGGG GAGCTTTACT
  TACTAGGAGA GTTGGGAAGA AGACCTGAGA CTGGGCGGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45450157	mCV23565886	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
ss321006262	CHEV_3_144344268	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30650285					SNP	A	A	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144387065 () rs orientation: forward

Symbol	Name	Function Class
Rr586705	regulatory region 586705	54 bp proximal
Rr586706	regulatory region 586706	870 bp proximal
Rr586707	regulatory region 586707	1516 bp proximal