rs30646733 SNP Detail

Summary

• ID
  rs30646733
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:7492070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTCT CAAAGCTGTT ATGTGTTTGA
  M
  GTGGGTAAAC CTAGGCTTCC GTTCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45449926	mCV24806633	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C
ss134556569	ENSMUSSNP977744	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		C
ss320642390	CHEV_3_7427010	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30646733					SNP	A	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7492070 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Pkia	protein kinase inhibitor, alpha	Intron
Rr573241	regulatory region 573241	1950 bp distal
Rr573242	regulatory region 573242	1831 bp proximal