rs30646436 SNP Detail

Summary

• ID
  rs30646436
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37204976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGCAAGGGAG GACAGGCAGA CAAGAGGCAG CTGCAAATGA ATCCCTGCCT CATAACTGGG
  GTCATTGTTT CAGGGGGAAG ATGGCAAGTG CTTTTTTTAA AAACTTGGAA ACAATATTTT
  TCTTTCATAG TTATATATCT TACTGAGGTG GTTGGACTGT TATCAGGACC TAATTTTTTT
  CAGTTTGTGT GTGTGTGTGT GTGTGTGTGT CTGTCTGTCT GTCTGTCTGT CTGTCTCTCT
  CTGTCTGTCT CTCTCTCTCT GTCTGTCTCT CTCTCTCTCT CTGTGTGTGT CTGTCTGTCT
  S
  TCTCTCTCTC TGTGTGTGTG TGTGTGTGTG TGCCCATTGG TGTTTTGCTT TATGTATGTC
  TGTGTGAGGC TGTCAGGTCT CCTGGGAATG GCAGCTCAGG GCCTAATTTC TGAGCTACAG
  GTGCTTTGAG GCATTGCTGA GTGCTGGTGT AGCTAAGAAG CTGGGGAAGC ATTGTCGATG
  TCAGGGTGCC GCCTTCCTGA AGTACAGTCC TGTGGCAAAC TGCTTATTTT GAGCTGAGAG
  CAAACTGACA AGAACCAGAG AGCAGAAACA CTCTCTGTAT TTCATTTTGC TGAAAGTTGT
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45450498	mCV22606964	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30646436					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37204976 () rs orientation: forward

Symbol	Name	Function Class
Gm64364	predicted gene, 64364	1644 bp upstream
Rr575420	regulatory region 575420	1412 bp proximal
Rr575421	regulatory region 575421	1655 bp proximal