rs30644817 SNP Detail

Summary

• ID
  rs30644817
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87243726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTT CTGAGCCTTA GGAGAAGGAG
  K
  TGTGATGTAG ATGCCCATCC ATTTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45450398	mCV23096275	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss135459159	ENSMUSSNP2052718	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss320832669	CHEV_3_87140341	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30644817					SNP	T	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87243726 () rs orientation: forward

Symbol	Name	Function Class
Rr579469	regulatory region 579469	1572 bp proximal