rs30643956 SNP Detail

Summary

• ID
  rs30643956
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83749649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTCAGCTC CAACTTCCTC
  ACTGCGGACA GCAGCAGCAA CAGAATCAGA AGGTAGACTG GAACATTCCG GCATGTTATA
  AAAACAAGGT TTGCTTTGTG TTACAAATAA CCCATGATCA GGCCACTGCT CTCCCAAGAG
  CCAGGTTGGA GACGAGATCA TGAGTAGGCA GAACACACAC CTCAGTGGAA TGTGCTTCAT
  R
  CTGCACAGCA GGGAGAAGGC CTCAGATAGA GACCAGGTAC TCTCAGGGTT CCTTAGAAAG
  CTAGGATGGG GAAAGACACA CCAACCTATC CTGCTGTGCT ATGATCCCAT ACACTCTTCC
  CTAGTGTGCA CACGTTCATG ACAAAGAGCA AGTAAGGGGA CAGCTGCTCA GAGGTTCAAA
  GCCCGACGTG CCTCCACAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss45948987	mCV24606528	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss133350190	ENSMUSSNP1027233	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs30643956					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83749649 () rs orientation: forward

Symbol	Name	Function Class
Rr632937	regulatory region 632937	1579 bp proximal
Tex261	testis expressed gene 261	Intron