rs30643932 SNP Detail

Summary

• ID
  rs30643932
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:84082046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

           T CCCTCCCTCC CTCTCTCTCT CCCTTCTTTA CCTGGAAAGG ATTGTTTTCC
  CCACAGGGTA CCTAATAACC CTCATCCCTT CTGAGTGTGC TGGCTTGCTG GACCCTCCCC
  ATCCCATACT GCACCCCTTG CCTCTGTGCA TTACTTTATG CCACCATGCC GTTCCAGCAG
  M
  TACAAGCCCT TCCTAGCATC CTGCACAGGA ATAGTTCCTG CCAGCCCTGC AGGTGCAGAT
  CAGGGCCACT TTCCCCCCCC CCCCCTGGGA AACATTCCAA GGCTGCTCCT GTGGGGAACA
  GCAGGCTGCC TCAGTTTTCC CTCATGAGAG GGCAAAATTG GGGGATGGTC ATCTGTTTGG
  ACTCAAGAAT GAGACCAGCT CATTCTCCAA GGAATGGCCC TGATAAAATC ACCGACTTGG
  TCCTCAGGGA CAGGTGGTGA CTTGGTGAGC AGCCGGCTCT GCTCCCTGGT GTTAATGAGC
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss45949095	mCV22531953	ABI	CRAMUS_MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs30643932					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84082046 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi17624	CpG island 17624			284 bp proximal
Dysf	dysferlin			Intron
				Noncoding-Transcript-Variant
Gm15475	predicted gene 15475			within coordinates
Rr632995	regulatory region 632995			within coordinates
Tssr61719	transcription start site region 61719			1905 bp downstream