rs30615628 SNP Detail

Summary

• ID
  rs30615628
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:67040415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGAACTC CCTGGTGGGA
  TCTATGGAGA CGGCCATGTC AATGCTGACA TGTTACACGA TTCAAGTTTA GGGCTGAAAA
  GCACAAGGGG ATAAATAGAC TGCCTGGCAG GCTCAGAACC CCTTACTGCC CAGTCTCTGG
  ATGGAGATGA ACAATGCCAC TGAGTTTTCC AAAGCAGCCA CTGGAAGGTT TTGAAACTAG
  R
  AATTAAAACC TCTGAAGGAA AAATGCATAA GAATAAAACC AACCATGTCT GCACGACACC
  TGAATGGAAA TGGTTCTTGC AGCCTCTACC CGAGGAGGGG CGTTGGTGTC AGCCTTTACT
  CTATGTGAGT TTAAGATCCT TAGAAAACTC TCCTAGCTCT TAAACATTAG TCAACAGCGG
  CATAAACACT GTCAGTGTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss44947683	mCV23035919	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30615628					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:67040415 () rs orientation: forward

Symbol	Name	Function Class
Lancl1	LanC (bacterial lantibiotic synthetase component C)-like 1	mRNA-UTR
Rr412496	regulatory region 412496	201 bp distal
Rr412497	regulatory region 412497	993 bp proximal